STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2146874P-loop containing nucleoside triphosphate hydrolase protein. (591 aa)    
Predicted Functional Partners:
C2G38_2219102
Ribosome production factor 2.
   
 
 0.995
C2G38_2148708
CBF/Mak21 family-domain-containing protein.
   
 
 0.993
C2G38_2244653
Eukaryotic rRNA processing.
   
 0.993
C2G38_2131708
Nop domain-containing protein.
  
 
 0.992
C2G38_578211
WD40-repeat-containing domain protein.
   
 
 0.991
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.990
C2G38_1976874
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
 
 0.989
C2G38_2000933
Uncharacterized protein.
   
 0.989
C2G38_1984126
Brix domain-containing protein.
   
   0.988
C2G38_2000493
Noc2p family-domain-containing protein.
   
 
 0.988
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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