Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_461295GATA-type domain-containing protein. (101 aa)    
Predicted Functional Partners:
C2G38_1960912
MADS-box domain-containing protein.
    
 0.623
C2G38_1924483
MADS-box domain-containing protein.
    
 0.623
C2G38_2243568
Uncharacterized protein.
    
 0.607
C2G38_428257
Uncharacterized protein.
    
 0.589
C2G38_795831
Uncharacterized protein.
    
 0.574
C2G38_2196643
CENP-A-nucleosome distal centromere subunit, CENP-P-domain-containing protein.
    
 0.574
C2G38_1946531
BZIP domain-containing protein.
    
 0.555
C2G38_1057520
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.542
C2G38_2020734
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.542
C2G38_1956656
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.542
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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