Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2146540AAA-ATPase_like domain-containing protein. (315 aa)    
Predicted Functional Partners:
C2G38_2042698
Kinase-like domain-containing protein.
    
 0.944
C2G38_2097414
Mad3/BUB1 homology region 1-domain-containing protein.
    
 0.944
C2G38_2088901
HORMA domain-containing protein.
    
 0.944
C2G38_2020145
Mitotic checkpoint protein BUB3-like protein.
    
 0.941
C2G38_1986575
Calponin homology domain-containing protein.
    
 0.874
C2G38_2183691
Cenp-O kinetochore centromere component-domain-containing protein.
   
 
 0.767
C2G38_2132731
WD40-repeat-containing domain protein.
    
 0.762
C2G38_1973400
WD40-repeat-containing domain protein.
    
 0.762
C2G38_2075868
WD40-repeat-containing domain protein.
    
 0.762
C2G38_1007703
Uncharacterized protein.
    
 0.762
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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