Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_1918023HIT-type domain-containing protein. (57 aa)    
Predicted Functional Partners:
C2G38_2131708
Nop domain-containing protein.
   
 
 0.957
C2G38_2134345
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
   
 
 0.898
C2G38_2049696
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 
 0.869
C2G38_2070977
Pre-RNA processing PIH1/Nop17-domain-containing protein.
    
 
 0.855
C2G38_2248937
Uncharacterized protein.
   
 
 0.806
C2G38_1176981
Uncharacterized protein.
    
   0.803
C2G38_2132386
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
 
 0.774
C2G38_1378901
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
 
 0.774
C2G38_1985218
Phospholipase/carboxylesterase/thioesterase.
    
   0.749
C2G38_2249746
HIT-type domain-containing protein.
    
 
 0.732
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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