Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
C2G38_2146477Uncharacterized protein. (468 aa)    
Predicted Functional Partners:
TRM8
tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
   
  
 0.759
C2G38_2041488
Methyltransferase TRM13-domain-containing protein.
   
  
 0.741
C2G38_1057436
Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase; Methylates the 2'-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop of substrate tRNAs.
   
  
 0.698
C2G38_1902023
WD_REPEATS_REGION domain-containing protein.
   
  
 0.695
C2G38_2133621
tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRM61; Catalytic subunit of tRNA (adenine-N(1)-)-methyltransferase, which catalyzes the formation of N(1)-methyladenine at position 58 (m1A58) in initiator methionyl-tRNA.
   
  
 0.681
C2G38_1989189
tRNA (guanine(26)-N(2))-dimethyltransferase.
   
  
 0.655
C2G38_1970742
Guanine-1-methyltransferase-domain-containing protein.
   
  
 0.641
C2G38_2084373
WD40-repeat-containing domain protein.
   
  
 0.636
C2G38_425053
Dihydrouridine synthase-domain-containing protein.
   
  
 0.633
C2G38_2050318
tRNA-dihydrouridine synthase; Catalyzes the synthesis of dihydrouridine, a modified base found in the D-loop of most tRNAs; Belongs to the dus family.
   
  
 0.630
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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