STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_1981497CHCH domain-containing protein. (75 aa)    
Predicted Functional Partners:
C2G38_1946531
BZIP domain-containing protein.
    
 0.962
C2G38_2124130
Ribosomal protein L6, alpha-beta domain-containing protein; Belongs to the universal ribosomal protein uL6 family.
    
  0.935
C2G38_1973465
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
   
 
 0.908
C2G38_1983537
30S ribosomal protein S12; Belongs to the universal ribosomal protein uS12 family.
   
 
 0.897
C2G38_1979392
Uncharacterized protein.
   
   0.896
C2G38_1973581
Uncharacterized protein.
   
 
 0.888
C2G38_1904078
Uncharacterized protein.
   
 
 0.887
C2G38_1128096
Ribosomal protein L6, alpha-beta domain-containing protein.
    
  0.883
C2G38_2026532
Mitochondrial ribosomal subunit S27-domain-containing protein.
   
 
 0.883
C2G38_2117895
Uncharacterized protein.
   
 
 0.874
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.