Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2043196RING-type domain-containing protein. (148 aa)    
Predicted Functional Partners:
C2G38_2058819
Ubiquitin-conjugating enzyme E2 2; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.968
C2G38_2199926
DNA polymerase family B-domain-containing protein.
    
 0.944
C2G38_1976471
Ubiquitin-conjugating enzyme/RWD-like protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.931
C2G38_1245129
DNA recombination and repair protein Rad51.
   
 
 0.919
C2G38_2133301
Ubiquitin-conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.896
C2G38_2255150
Uncharacterized protein.
    
 0.895
C2G38_2255775
DNA polymerase.
    
 0.893
C2G38_2240782
DNA_pol_B domain-containing protein.
    
 0.893
C2G38_398093
SNF2 family N-terminal domain-containing protein.
    
 0.887
C2G38_2192617
SNF2 family N-terminal domain-containing protein.
    
 0.887
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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