Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
C2G38_2005393DNA polymerase family A-domain-containing protein. (956 aa)    
Predicted Functional Partners:
C2G38_2131184
AA_TRNA_LIGASE_II domain-containing protein.
    
 0.987
C2G38_2043200
P-loop containing nucleoside triphosphate hydrolase protein.
   
 
 0.889
C2G38_273120
DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family.
   
 
 0.878
FEN1
Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...]
  
 
 0.852
C2G38_2131496
PIN domain-like protein.
  
 
 0.852
C2G38_2203207
Fanconi anaemia protein FANCD2.
   
 0.844
C2G38_1039105
Triosephosphate isomerase.
    
 0.765
C2G38_2165753
Uncharacterized protein.
  
 
 0.749
C2G38_2255452
AAA domain-containing protein.
    
 0.710
C2G38_360107
Restriction endonuclease type II-like protein.
     
 0.702
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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