Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_135074Uncharacterized protein. (169 aa)    
Predicted Functional Partners:
C2G38_1988472
P-loop containing nucleoside triphosphate hydrolase protein.
    
 0.857
C2G38_1982616
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
    
 0.846
C2G38_651282
Uncharacterized protein.
    
 
 0.839
C2G38_2030978
Uncharacterized protein.
    
 0.829
C2G38_2255452
AAA domain-containing protein.
     
 0.793
C2G38_23972
Metallo-dependent phosphatase-like protein; Belongs to the MRE11/RAD32 family.
     
  0.777
C2G38_2132131
CCHC-type domain-containing protein.
    
 0.751
C2G38_2046057
Uncharacterized protein.
    
  0.609
C2G38_1966168
RRM domain-containing protein.
     
 0.581
C2G38_2020322
J domain-containing protein.
     
  0.580
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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