Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_217154Cyclin-like protein; Belongs to the cyclin family. (358 aa)    
Predicted Functional Partners:
C2G38_1982506
CTD kinase subunit gamma CTK3-domain-containing protein.
    
 
 0.964
C2G38_1973128
Pkinase-domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.948
C2G38_1233148
Kinase-like domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.948
C2G38_168616
Uncharacterized protein.
    
  0.871
C2G38_2078712
MIF4G like-domain-containing protein.
    
  0.871
C2G38_2012223
Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene.
    
 0.862
C2G38_350027
RRM domain-containing protein.
   
   0.820
C2G38_2164398
RRM domain-containing protein.
   
   0.820
C2G38_2255433
t-SNARE coiled-coil homology domain-containing protein.
    
  0.819
C2G38_2222100
t-SNARE coiled-coil homology domain-containing protein.
    
  0.819
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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