Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_360107Restriction endonuclease type II-like protein. (357 aa)    
Predicted Functional Partners:
C2G38_2213088
XPA protein C-terminus-domain-containing protein.
    
 0.993
C2G38_2185999
Fanconi anemia, complementation group L.
    
 0.987
C2G38_2006216
ERCC4 domain-containing protein.
   
 0.986
C2G38_802098
Uncharacterized protein.
   
 0.985
C2G38_802113
Uncharacterized protein.
   
 0.985
C2G38_2252644
ERCC4 domain-containing protein.
   
 0.985
C2G38_2050738
NPL4 family-domain-containing protein.
    
 0.980
C2G38_2221939
AA_TRNA_LIGASE_II domain-containing protein.
   
 0.976
C2G38_2098880
Nuclear envelope protein.
   
 0.976
C2G38_2165753
Uncharacterized protein.
    
 0.973
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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