Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2204349XPC-binding domain-containing protein. (384 aa)    
Predicted Functional Partners:
C2G38_2199004
Uncharacterized protein.
   
 0.995
C2G38_2146470
PAW domain-containing protein.
    
 0.994
C2G38_1085860
P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the AAA ATPase family.
   
 0.992
C2G38_2213088
XPA protein C-terminus-domain-containing protein.
    
 0.986
C2G38_1877423
Machado-joseph disease protein MJD.
    
 0.986
C2G38_1967352
P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the AAA ATPase family.
   
 0.981
C2G38_681475
Proteasome complex subunit Rpn13 ubiquitin receptor-domain-containing protein.
   
 0.978
C2G38_1877775
26S proteasome non-ATPase regulatory subunit 14.
   
 0.977
C2G38_2154269
Ubiquitin conjugation factor E4.
   
 0.975
C2G38_1979889
COP9 signalosome.
   
 0.974
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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