Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2203984VHS domain-containing protein. (361 aa)    
Predicted Functional Partners:
C2G38_1988588
CPS1 protein; Belongs to the small GTPase superfamily. Arf family.
    
 0.853
C2G38_2071883
ADP-ribosylation factor family-domain-containing protein; Belongs to the small GTPase superfamily. Arf family.
    
 0.853
C2G38_2047666
Uncharacterized protein.
    
 
 0.819
C2G38_2012836
Uncharacterized protein.
    
 
 0.806
C2G38_1983453
Putative ADP-ribosylation factor; Belongs to the small GTPase superfamily. Arf family.
    
 0.783
C2G38_235602
ARF-like protein; Belongs to the small GTPase superfamily. Arf family.
    
 0.783
C2G38_2050277
Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.
    
 
 0.762
C2G38_2168148
Uncharacterized protein.
     
 0.752
C2G38_2218861
SH3 domain-containing protein.
   
 
 0.703
C2G38_2043285
Ysc84 domain-containing protein.
   
 
 0.703
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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