Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_1978536PWI domain-containing protein. (148 aa)    
Predicted Functional Partners:
C2G38_1962845
Uncharacterized protein.
   
 0.968
C2G38_1980661
P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the DEAD box helicase family.
   
 0.952
C2G38_2046057
Uncharacterized protein.
   
 0.948
C2G38_1931233
Uncharacterized protein.
   
 0.946
C2G38_1981902
Uncharacterized protein.
   
 0.945
C2G38_1958716
U1 small nuclear ribonucleo protein of 70kDa MW N terminal-domain-containing protein.
   
 
 0.932
C2G38_2133108
PWI domain-containing protein.
   
 0.930
C2G38_488220
Uncharacterized protein.
   
 0.930
C2G38_721175
Cwf21 domain-containing protein.
   
 0.928
C2G38_2250186
SART-1 protein.
   
 
 0.926
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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