STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2103824Protein kish; Involved in the early part of the secretory pathway. Belongs to the KISH family. (71 aa)    
Predicted Functional Partners:
C2G38_2194622
Alba domain-containing protein.
     
 0.654
C2G38_2182985
Short-chain dehydrogenase/reductase SDR.
    
  0.622
C2G38_2096428
RNAse P Rpr2/Rpp21/SNM1 subunit domain-containing protein.
   
 
  0.606
C2G38_2242228
RNAse P Rpr2/Rpp21/SNM1 subunit domain-containing protein.
   
 
  0.606
C2G38_2156694
Uncharacterized protein.
   
 
  0.606
C2G38_631466
Yos1-like protein.
   
   0.599
C2G38_2024823
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
     
 0.508
C2G38_251208
Splicing factor subunit; Belongs to the SF3B5 family.
   
    0.457
C2G38_2190679
Small nuclear ribonucleoprotein G.
   
    0.436
C2G38_2019696
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
    0.408
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.