Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_213257860S ribosomal protein L20; Belongs to the eukaryotic ribosomal protein eL20 family. (174 aa)    
Predicted Functional Partners:
C2G38_2132063
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
 
 
 0.999
C2G38_2224309
60S ribosomal protein L14e.
   
 0.998
C2G38_1991173
60S ribosomal protein L2.
   
 0.998
C2G38_2023778
60S ribosomal protein L7.
   
 0.998
C2G38_2133472
Ribosomal protein L5 domain-containing protein; Belongs to the universal ribosomal protein uL5 family.
   
 0.998
C2G38_2135650
Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.
   
 0.998
C2G38_1980245
60s acidic ribosomal protein; Belongs to the eukaryotic ribosomal protein P1/P2 family.
   
 0.998
C2G38_2106237
60S ribosomal protein L28-A; Belongs to the universal ribosomal protein uL15 family.
   
 0.998
C2G38_2041413
60S ribosomal protein L28.
   
 0.998
C2G38_1975285
60S ribosomal protein L21-A.
  
 0.998
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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