Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_107055Uncharacterized protein. (225 aa)    
Predicted Functional Partners:
C2G38_1429789
Arf-GAP domain-containing protein.
    
 0.946
C2G38_232154
Arf-GAP domain-containing protein.
    
 0.847
C2G38_2200324
Uncharacterized protein.
    
 0.799
C2G38_1999353
Uncharacterized protein.
    
 0.799
C2G38_1933399
ANTH domain-containing protein.
   
   0.786
C2G38_2047666
Uncharacterized protein.
    
 
 0.772
C2G38_1978249
Arf-GAP domain-containing protein.
 
   
  0.769
C2G38_2116085
Oxysterol-binding protein; Belongs to the OSBP family.
    
 
 0.756
C2G38_2186669
PH domain-containing protein.
    
 0.739
C2G38_2085137
ANTH-domain-containing protein.
    
 
 0.694
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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