STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_1979076S-adenosyl-L-methionine-dependent methyltransferase. (140 aa)    
Predicted Functional Partners:
C2G38_1963383
Uncharacterized protein.
    
 0.613
C2G38_2110899
Bystin.
   
  0.599
C2G38_1969097
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
    
  0.587
C2G38_1986119
KH domain-containing protein.
   
  0.584
C2G38_2122194
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
    
  0.579
C2G38_1969382
40S ribosomal protein S27.
    
  0.579
C2G38_2263768
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
    
  0.579
C2G38_1963210
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
    
  0.578
C2G38_1963177
40S ribosomal protein S1.
    
  0.578
C2G38_2036607
Low temperature viability protein.
   
  0.574
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.