STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2250667P-loop containing nucleoside triphosphate hydrolase protein. (841 aa)    
Predicted Functional Partners:
C2G38_1996931
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
  
 0.994
C2G38_2132100
40S ribosomal protein s2; Belongs to the universal ribosomal protein uS5 family.
  
 0.993
C2G38_2034522
Putative 40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
  
 0.993
C2G38_1991173
60S ribosomal protein L2.
  
 0.992
C2G38_993425
50S ribosomal protein L30e-like protein.
  
 0.992
C2G38_2270863
WD40-repeat-containing domain protein.
   
 
 0.991
C2G38_2263768
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 0.991
C2G38_2122194
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
   
 0.990
C2G38_1977790
60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.
   
 0.990
C2G38_2000617
60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
  
 0.990
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.