STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2205292Uncharacterized protein. (377 aa)    
Predicted Functional Partners:
C2G38_2087926
Uncharacterized protein.
    
 0.722
C2G38_2074506
Kinase-like domain-containing protein.
    
  0.710
C2G38_1972287
WD40-repeat-containing domain protein.
    
  0.635
C2G38_714187
Transcription initiation factor TFIID subunit A-domain-containing protein.
    
  0.623
C2G38_2133367
Transcription initiation factor IID, 18kD subunit-domain-containing protein.
    
  0.622
C2G38_1990814
Transcription initiation factor IID, 31kD subunit-domain-containing protein.
    
  0.619
C2G38_2231320
Histone acetyltransferases subunit 3-domain-containing protein.
    
  0.587
C2G38_2204396
Ribosomal protein L18e/L15P.
    
   0.576
C2G38_2079577
Translation protein SH3-like domain-containing protein.
    
   0.570
C2G38_2037791
WD40-repeat-containing domain protein.
    
  0.562
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.