Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C2G38_1289857 | C2G38_1971193 | A0A397VAQ2 | A0A397UZZ8 | RRM domain-containing protein. | Uncharacterized protein. | 0.841 |
C2G38_1289857 | C2G38_1976874 | A0A397VAQ2 | A0A397UR47 | RRM domain-containing protein. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.998 |
C2G38_1289857 | C2G38_2058551 | A0A397VAQ2 | A0A397W1Z5 | RRM domain-containing protein. | Ribosomal protein L1. | 0.999 |
C2G38_1289857 | C2G38_2131241 | A0A397VAQ2 | A0A397VV47 | RRM domain-containing protein. | Mitochondrial GTPase 1; Mitochondrial GTPase involved in assembly of the large ribosomal subunit. Plays a role in expression of the mitochondrial translational machinery; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | 0.999 |
C2G38_1289857 | C2G38_2191205 | A0A397VAQ2 | A0A397V4V1 | RRM domain-containing protein. | NOL1/NOP2/sun family putative RNA met; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.997 |
C2G38_1289857 | C2G38_51682 | A0A397VAQ2 | A0A397UR63 | RRM domain-containing protein. | RNA helicase. | 0.998 |
C2G38_1289857 | C2G38_578211 | A0A397VAQ2 | A0A397U981 | RRM domain-containing protein. | WD40-repeat-containing domain protein. | 0.993 |
C2G38_1289857 | ERB1 | A0A397VAQ2 | A0A397V0T6 | RRM domain-containing protein. | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.995 |
C2G38_1289857 | NOP7 | A0A397VAQ2 | A0A397UWA5 | RRM domain-containing protein. | Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.997 |
C2G38_1289857 | YTM1 | A0A397VAQ2 | A0A397TTF2 | RRM domain-containing protein. | Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.997 |
C2G38_1971193 | C2G38_1289857 | A0A397UZZ8 | A0A397VAQ2 | Uncharacterized protein. | RRM domain-containing protein. | 0.841 |
C2G38_1971193 | C2G38_1976874 | A0A397UZZ8 | A0A397UR47 | Uncharacterized protein. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.938 |
C2G38_1971193 | C2G38_2058551 | A0A397UZZ8 | A0A397W1Z5 | Uncharacterized protein. | Ribosomal protein L1. | 0.994 |
C2G38_1971193 | C2G38_2131241 | A0A397UZZ8 | A0A397VV47 | Uncharacterized protein. | Mitochondrial GTPase 1; Mitochondrial GTPase involved in assembly of the large ribosomal subunit. Plays a role in expression of the mitochondrial translational machinery; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | 0.899 |
C2G38_1971193 | C2G38_2191205 | A0A397UZZ8 | A0A397V4V1 | Uncharacterized protein. | NOL1/NOP2/sun family putative RNA met; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.953 |
C2G38_1971193 | C2G38_51682 | A0A397UZZ8 | A0A397UR63 | Uncharacterized protein. | RNA helicase. | 0.997 |
C2G38_1971193 | C2G38_578211 | A0A397UZZ8 | A0A397U981 | Uncharacterized protein. | WD40-repeat-containing domain protein. | 0.784 |
C2G38_1971193 | ERB1 | A0A397UZZ8 | A0A397V0T6 | Uncharacterized protein. | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.913 |
C2G38_1971193 | NOP7 | A0A397UZZ8 | A0A397UWA5 | Uncharacterized protein. | Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.913 |
C2G38_1971193 | YTM1 | A0A397UZZ8 | A0A397TTF2 | Uncharacterized protein. | Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.809 |
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