STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_1980457Methylmalonate-semialdehyde dehydrogenase. (552 aa)    
Predicted Functional Partners:
C2G38_2131731
NAD binding domain of 6-phosphogluconate dehydrogenase-domain-containing protein.
   
 0.970
C2G38_1980178
Acyl-CoA dehydrogenase/oxidase.
   
 0.891
C2G38_2132759
3-hydroxyisobutyryl-CoA hydrolase, mitochondrial; Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite; Belongs to the enoyl-CoA hydratase/isomerase family.
   
 0.887
C2G38_2092795
ClpP/crotonase-like domain-containing protein; Belongs to the enoyl-CoA hydratase/isomerase family.
   
 0.865
C2G38_2192922
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
0.853
C2G38_2184182
Malate synthase; Belongs to the malate synthase family.
   
 
 0.842
C2G38_2210184
ClpP/crotonase-like domain-containing protein; Belongs to the enoyl-CoA hydratase/isomerase family.
   
 0.831
C2G38_1129330
Thiolase, N-terminal domain-containing protein; Belongs to the thiolase-like superfamily. Thiolase family.
   
 0.831
C2G38_2132088
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
   
 
 0.829
C2G38_1982936
ClpP/crotonase-like domain-containing protein; Belongs to the enoyl-CoA hydratase/isomerase family.
   
 0.812
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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