STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2199671Uncharacterized protein. (269 aa)    
Predicted Functional Partners:
C2G38_2026447
YjeF N-terminal domain-containing protein.
  
 0.890
C2G38_788355
Uncharacterized protein.
    
 0.888
C2G38_940613
Topoisomerase II-associated protein PAT1.
    
 0.876
C2G38_2050571
Ge1_WD40 domain-containing protein.
    
 0.825
C2G38_1567066
Ge1_WD40 domain-containing protein.
    
 0.825
LSM1
U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.
    
 0.782
C2G38_1958448
CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen.
  
 
 0.743
C2G38_1987820
Putative 5-3 exonuclease.
    
 0.742
C2G38_1291956
Putative 5-3 exonuclease.
    
 0.742
C2G38_1292045
XRN1_D2_D3 domain-containing protein.
    
 0.742
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.