STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_1976258Potassium channel regulatory factor. (342 aa)    
Predicted Functional Partners:
C2G38_2229063
Pre-mRNA-splicing factor SLU7.
   
 0.997
C2G38_2104441
Pre-mRNA splicing factor component-domain-containing protein.
   
 
 0.991
C2G38_2156242
Sec63 Brl domain-containing protein.
    
 
 0.990
C2G38_1975849
Cell cycle control protein cwf14.
    
 
 0.988
C2G38_2202603
WD40-repeat-containing domain protein.
   
 0.981
C2G38_1985976
PRP8 pre-mRNA processing factor 8.
    
 
 0.965
C2G38_1997931
Armadillo-type protein.
   
 0.960
C2G38_2047672
SYF2 splicing factor-domain-containing protein.
   
 0.952
C2G38_1940179
CWC16 protein.
    
 0.937
C2G38_2045976
Pre-mRNA splicing factor-domain-containing protein.
    
 0.937
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.