STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2199330Uncharacterized protein. (223 aa)    
Predicted Functional Partners:
C2G38_2121749
Ribosome biogenesis protein Nop16.
   
    0.881
C2G38_740450
Uncharacterized protein.
   
    0.856
C2G38_2146874
P-loop containing nucleoside triphosphate hydrolase protein.
   
   0.785
C2G38_2125695
Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family.
   
    0.775
C2G38_1289857
RRM domain-containing protein.
   
    0.772
C2G38_1913141
Fcf1-domain-containing protein.
   
    0.772
C2G38_1568972
Uncharacterized protein.
   
    0.770
C2G38_1955795
P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the DEAD box helicase family.
   
    0.770
C2G38_2131708
Nop domain-containing protein.
   
   0.740
C2G38_2197418
Complex1_30kDa domain-containing protein.
   
   0.736
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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