Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C2G38_1884167 | C2G38_1956880 | A0A397UV13 | A0A397VRF8 | Uncharacterized protein. | P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the DEAD box helicase family. | 0.698 |
C2G38_1884167 | C2G38_1973994 | A0A397UV13 | A0A397UV67 | Uncharacterized protein. | DNA polymerase alpha/epsilon subunit B-domain-containing protein. | 0.816 |
C2G38_1884167 | C2G38_1988889 | A0A397UV13 | A0A397U1L9 | Uncharacterized protein. | Small nuclear ribonucleoprotein Sm D2. | 0.754 |
C2G38_1884167 | C2G38_2006216 | A0A397UV13 | A0A397UN72 | Uncharacterized protein. | ERCC4 domain-containing protein. | 0.767 |
C2G38_1884167 | C2G38_2019696 | A0A397UV13 | A0A397URX8 | Uncharacterized protein. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.770 |
C2G38_1884167 | C2G38_2074506 | A0A397UV13 | A0A397VK24 | Uncharacterized protein. | Kinase-like domain-containing protein. | 0.812 |
C2G38_1884167 | C2G38_2190679 | A0A397UV13 | A0A397VA88 | Uncharacterized protein. | Small nuclear ribonucleoprotein G. | 0.755 |
C2G38_1884167 | C2G38_2228554 | A0A397UV13 | A0A397U077 | Uncharacterized protein. | Putative membrane-associated protein. | 0.771 |
C2G38_1884167 | C2G38_68757 | A0A397UV13 | A0A397UWG2 | Uncharacterized protein. | Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. | 0.769 |
C2G38_1884167 | FEN1 | A0A397UV13 | A0A397U9H6 | Uncharacterized protein. | Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] | 0.643 |
C2G38_1956880 | C2G38_1884167 | A0A397VRF8 | A0A397UV13 | P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the DEAD box helicase family. | Uncharacterized protein. | 0.698 |
C2G38_1956880 | C2G38_1988889 | A0A397VRF8 | A0A397U1L9 | P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the DEAD box helicase family. | Small nuclear ribonucleoprotein Sm D2. | 0.853 |
C2G38_1956880 | C2G38_2019696 | A0A397VRF8 | A0A397URX8 | P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the DEAD box helicase family. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.876 |
C2G38_1956880 | C2G38_2074506 | A0A397VRF8 | A0A397VK24 | P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the DEAD box helicase family. | Kinase-like domain-containing protein. | 0.777 |
C2G38_1956880 | C2G38_2190679 | A0A397VRF8 | A0A397VA88 | P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the DEAD box helicase family. | Small nuclear ribonucleoprotein G. | 0.836 |
C2G38_1956880 | C2G38_2228554 | A0A397VRF8 | A0A397U077 | P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the DEAD box helicase family. | Putative membrane-associated protein. | 0.886 |
C2G38_1956880 | C2G38_68757 | A0A397VRF8 | A0A397UWG2 | P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the DEAD box helicase family. | Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. | 0.897 |
C2G38_1973994 | C2G38_1884167 | A0A397UV67 | A0A397UV13 | DNA polymerase alpha/epsilon subunit B-domain-containing protein. | Uncharacterized protein. | 0.816 |
C2G38_1973994 | FEN1 | A0A397UV67 | A0A397U9H6 | DNA polymerase alpha/epsilon subunit B-domain-containing protein. | Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] | 0.982 |
C2G38_1988889 | C2G38_1884167 | A0A397U1L9 | A0A397UV13 | Small nuclear ribonucleoprotein Sm D2. | Uncharacterized protein. | 0.754 |
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