STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_1887838P-loop containing nucleoside triphosphate hydrolase protein. (459 aa)    
Predicted Functional Partners:
C2G38_1988315
eRF1_1 domain-containing protein.
   
 0.999
C2G38_2048760
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
    
 0.966
C2G38_2247911
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 
 0.956
C2G38_977094
ATP dependent helicase.
    
 0.923
C2G38_977047
Uncharacterized protein.
    
 0.923
C2G38_1454066
P-loop containing nucleoside triphosphate hydrolase protein.
   
 
 0.912
C2G38_2034522
Putative 40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
 0.902
C2G38_2037734
40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
   
 0.890
C2G38_1963177
40S ribosomal protein S1.
   
  0.874
C2G38_2144769
Uncharacterized protein.
    
 0.872
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.