STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_1704604DNA-directed RNA polymerase III subunit RPC8. (238 aa)    
Predicted Functional Partners:
C2G38_2233595
DNA-directed RNA polymerase.
   
 0.990
C2G38_2049022
RNA polymerase Rpc34.
   
 0.988
C2G38_2125139
DNA directed RNA polymerase.
   
 0.987
C2G38_2042709
RNA polymerase Rpb4-domain-containing protein.
   
 0.987
C2G38_1991036
RNA polymerase I.
   
 0.986
C2G38_463161
DNA-directed RNA polymerases I and III subunit RPAC1-like protein.
   
 0.986
C2G38_1989258
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.983
C2G38_488992
Sin-like protein conserved region-domain-containing protein.
   
 0.983
C2G38_2201028
DNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs.
   
 0.983
C2G38_1972823
DNA-directed RNA polymerase, subunit RPB6.
   
 0.983
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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