STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2144060Uncharacterized protein. (74 aa)    
Predicted Functional Partners:
C2G38_2087926
Uncharacterized protein.
    
 0.839
C2G38_2034522
Putative 40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
    
  0.774
C2G38_2137193
WD40-repeat-containing domain protein.
    
  0.713
C2G38_428257
Uncharacterized protein.
    
 0.711
C2G38_1988266
Ubiquitin and ribosomal protein S27a-like protein.
    
  0.690
C2G38_1336660
Serine/threonine-protein phosphatase.
    
  0.684
C2G38_1976471
Ubiquitin-conjugating enzyme/RWD-like protein; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.673
C2G38_2148766
Glycerophosphoryl diester phosphodiesterase family-domain-containing protein.
    
 0.660
C2G38_2198616
Ubiquitin-like protein 1.
    
  0.660
C2G38_2014629
BTB/POZ protein; Belongs to the SKP1 family.
    
  0.658
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.