STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_19366Proteasome maturation factor UMP1. (138 aa)    
Predicted Functional Partners:
C2G38_2173977
Proteasome subunit alpha type.
   
 
 0.982
C2G38_2201615
Proteasome subunit beta; Belongs to the peptidase T1B family.
   
 
 0.976
C2G38_2249178
Proteasome subunit alpha type.
   
 
 0.976
C2G38_1974916
Proteasome subunit alpha type.
   
 
 0.975
C2G38_2128226
Proteasome subunit beta.
   
 
 0.970
C2G38_2207835
Nucleophile aminohydrolase.
   
 
 0.970
C2G38_1998163
Proteasome subunit alpha type.
   
 
 0.970
C2G38_1999779
Proteasome subunit alpha type.
   
 
 0.966
C2G38_2012104
Proteasome subunit alpha type.
   
 
 0.966
C2G38_2169244
Proteasome subunit beta.
   
 
 0.962
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.