C2G38_2191590 protein (Gigaspora rosea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

C2G38_2191590

Uncharacterized protein. (329 aa)

Predicted Functional Partners:

C2G38_2217484

0.739

C2G38_2036763

0.589

C2G38_1966074

0.589

C2G38_2298766

0.589

C2G38_2034447

0.589

C2G38_2243239

0.589

C2G38_2176818

0.589

C2G38_2028439

0.551

C2G38_1989812

0.538

C2G38_2015479

0.536

Your Current Organism:

Gigaspora rosea

NCBI taxonomy Id: 44941
Other names: G. rosea

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C2G38_1966074	C2G38_1989812	A0A397VDA7	A0A397TZY4	Glutamate-cysteine ligase catalytic subunit.	Glutathione synthetase.	0.770
C2G38_1966074	C2G38_2191590	A0A397VDA7	A0A397UZY7	Glutamate-cysteine ligase catalytic subunit.	Uncharacterized protein.	0.589
C2G38_1989812	C2G38_1966074	A0A397TZY4	A0A397VDA7	Glutathione synthetase.	Glutamate-cysteine ligase catalytic subunit.	0.770
C2G38_1989812	C2G38_2034447	A0A397TZY4	A0A397VJ50	Glutathione synthetase.	Uncharacterized protein.	0.770
C2G38_1989812	C2G38_2036763	A0A397TZY4	A0A397V887	Glutathione synthetase.	Glutamate-cysteine ligase-domain-containing protein.	0.770
C2G38_1989812	C2G38_2176818	A0A397TZY4	A0A397VQC8	Glutathione synthetase.	Glutamate-cysteine ligase-domain-containing protein.	0.770
C2G38_1989812	C2G38_2191590	A0A397TZY4	A0A397UZY7	Glutathione synthetase.	Uncharacterized protein.	0.538
C2G38_1989812	C2G38_2243239	A0A397TZY4	A0A397VL40	Glutathione synthetase.	Glutamate-cysteine ligase-domain-containing protein.	0.770
C2G38_1989812	C2G38_2298766	A0A397TZY4	A0A397VIT7	Glutathione synthetase.	Glutamate--cysteine ligase catalytic subunit.	0.770
C2G38_2015479	C2G38_2191590	A0A397VE21	A0A397UZY7	Putative dihydroxyacetone kinase 1.	Uncharacterized protein.	0.536
C2G38_2028439	C2G38_2191590	A0A397W3D0	A0A397UZY7	Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities.	Uncharacterized protein.	0.551
C2G38_2028439	C2G38_2217484	A0A397W3D0	A0A397U7T6	Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities.	Tryptophan synthase.	0.998
C2G38_2034447	C2G38_1989812	A0A397VJ50	A0A397TZY4	Uncharacterized protein.	Glutathione synthetase.	0.770
C2G38_2034447	C2G38_2191590	A0A397VJ50	A0A397UZY7	Uncharacterized protein.	Uncharacterized protein.	0.589
C2G38_2036763	C2G38_1989812	A0A397V887	A0A397TZY4	Glutamate-cysteine ligase-domain-containing protein.	Glutathione synthetase.	0.770
C2G38_2036763	C2G38_2191590	A0A397V887	A0A397UZY7	Glutamate-cysteine ligase-domain-containing protein.	Uncharacterized protein.	0.589
C2G38_2176818	C2G38_1989812	A0A397VQC8	A0A397TZY4	Glutamate-cysteine ligase-domain-containing protein.	Glutathione synthetase.	0.770
C2G38_2176818	C2G38_2191590	A0A397VQC8	A0A397UZY7	Glutamate-cysteine ligase-domain-containing protein.	Uncharacterized protein.	0.589
C2G38_2191590	C2G38_1966074	A0A397UZY7	A0A397VDA7	Uncharacterized protein.	Glutamate-cysteine ligase catalytic subunit.	0.589
C2G38_2191590	C2G38_1989812	A0A397UZY7	A0A397TZY4	Uncharacterized protein.	Glutathione synthetase.	0.538