STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_1973321Vps53-like protein. (840 aa)    
Predicted Functional Partners:
C2G38_2191436
Uncharacterized protein.
    
 0.999
C2G38_2179008
Sac2 family-domain-containing protein.
   
 0.994
C2G38_2025074
Vps54-like protein.
   
 0.984
C2G38_2184248
Vps54-like protein.
   
 0.984
C2G38_2120856
Ras family-domain-containing protein.
    
 0.926
C2G38_2022767
Protein TSSC1.
    
 
 0.894
C2G38_2247317
Thioredoxin reductase.
 
      0.893
C2G38_2222100
t-SNARE coiled-coil homology domain-containing protein.
   
 0.868
C2G38_2255433
t-SNARE coiled-coil homology domain-containing protein.
   
 0.845
C2G38_2071390
Dor1-like family-domain-containing protein.
   
 
 0.837
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.