STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_1726759DNA glycosylase. (248 aa)    
Predicted Functional Partners:
C2G38_1673467
Uncharacterized protein.
    
 0.855
C2G38_770948
WD40-repeat-containing domain protein.
    
 0.855
C2G38_1057520
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.843
C2G38_2020734
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.843
C2G38_1956656
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.843
C2G38_513290
Uncharacterized protein.
    
 0.843
C2G38_2043485
Chromo domain-containing protein.
    
 0.838
C2G38_1697761
P-loop containing nucleoside triphosphate hydrolase protein.
    
 0.838
C2G38_2243357
Uncharacterized protein.
    
 0.838
C2G38_2235633
Hist_deacetyl domain-containing protein.
    
 0.759
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.