Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C2G38_1989341 | C2G38_2017168 | A0A397U910 | A0A397VAS3 | Phosphoribosylglycinamide formyltransferase. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.930 |
C2G38_1989341 | C2G38_2118758 | A0A397U910 | A0A397U4S7 | Phosphoribosylglycinamide formyltransferase. | UreD urease accessory protein. | 0.948 |
C2G38_1989341 | C2G38_2133158 | A0A397U910 | A0A397UG74 | Phosphoribosylglycinamide formyltransferase. | Cytidine deaminase-like protein. | 0.961 |
C2G38_1989341 | C2G38_2143016 | A0A397U910 | A0A397V2C6 | Phosphoribosylglycinamide formyltransferase. | Tetrahydrofolate dehydrogenase/cyclohydrolase. | 0.873 |
C2G38_1989341 | C2G38_2189222 | A0A397U910 | A0A397V3V5 | Phosphoribosylglycinamide formyltransferase. | Cytidine deaminase-like protein. | 0.953 |
C2G38_1989341 | C2G38_2199381 | A0A397U910 | A0A397URT9 | Phosphoribosylglycinamide formyltransferase. | Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. | 0.515 |
C2G38_1989341 | C2G38_2217124 | A0A397U910 | A0A397U9Q6 | Phosphoribosylglycinamide formyltransferase. | Cobalamin-independent synthase. | 0.524 |
C2G38_1989341 | C2G38_2228778 | A0A397U910 | A0A397TYT6 | Phosphoribosylglycinamide formyltransferase. | Cytidine deaminase-like protein. | 0.964 |
C2G38_1989341 | C2G38_2250045 | A0A397U910 | A0A397UN91 | Phosphoribosylglycinamide formyltransferase. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.930 |
C2G38_1989341 | C2G38_2318760 | A0A397U910 | A0A397W1W8 | Phosphoribosylglycinamide formyltransferase. | Phosphoribosylglycinamide synthetase. | 0.993 |
C2G38_2017168 | C2G38_1989341 | A0A397VAS3 | A0A397U910 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Phosphoribosylglycinamide formyltransferase. | 0.930 |
C2G38_2017168 | C2G38_2118758 | A0A397VAS3 | A0A397U4S7 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | UreD urease accessory protein. | 0.910 |
C2G38_2017168 | C2G38_2133158 | A0A397VAS3 | A0A397UG74 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Cytidine deaminase-like protein. | 0.911 |
C2G38_2017168 | C2G38_2143016 | A0A397VAS3 | A0A397V2C6 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Tetrahydrofolate dehydrogenase/cyclohydrolase. | 0.864 |
C2G38_2017168 | C2G38_2189222 | A0A397VAS3 | A0A397V3V5 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Cytidine deaminase-like protein. | 0.911 |
C2G38_2017168 | C2G38_2199381 | A0A397VAS3 | A0A397URT9 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. | 0.965 |
C2G38_2017168 | C2G38_2217124 | A0A397VAS3 | A0A397U9Q6 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Cobalamin-independent synthase. | 0.659 |
C2G38_2017168 | C2G38_2228778 | A0A397VAS3 | A0A397TYT6 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Cytidine deaminase-like protein. | 0.911 |
C2G38_2017168 | C2G38_2318760 | A0A397VAS3 | A0A397W1W8 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Phosphoribosylglycinamide synthetase. | 0.953 |
C2G38_2118758 | C2G38_1989341 | A0A397U4S7 | A0A397U910 | UreD urease accessory protein. | Phosphoribosylglycinamide formyltransferase. | 0.948 |
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