Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C2G38_1289857 | C2G38_2000493 | A0A397VAQ2 | A0A397V829 | RRM domain-containing protein. | Noc2p family-domain-containing protein. | 0.998 |
C2G38_1289857 | C2G38_2002247 | A0A397VAQ2 | A0A397UZE8 | RRM domain-containing protein. | RL10P_insert domain-containing protein. | 0.996 |
C2G38_1289857 | C2G38_2131241 | A0A397VAQ2 | A0A397VV47 | RRM domain-containing protein. | Mitochondrial GTPase 1; Mitochondrial GTPase involved in assembly of the large ribosomal subunit. Plays a role in expression of the mitochondrial translational machinery; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | 0.999 |
C2G38_1289857 | C2G38_2196666 | A0A397VAQ2 | A0A397V3J0 | RRM domain-containing protein. | Uncharacterized protein. | 0.967 |
C2G38_1289857 | C2G38_2219102 | A0A397VAQ2 | A0A397UE40 | RRM domain-containing protein. | Ribosome production factor 2. | 0.998 |
C2G38_1289857 | C2G38_2244653 | A0A397VAQ2 | A0A397VCY7 | RRM domain-containing protein. | Eukaryotic rRNA processing. | 0.998 |
C2G38_1289857 | C2G38_774532 | A0A397VAQ2 | A0A397TZW2 | RRM domain-containing protein. | Brix domain-containing protein. | 0.998 |
C2G38_1289857 | ERB1 | A0A397VAQ2 | A0A397V0T6 | RRM domain-containing protein. | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.995 |
C2G38_1289857 | NOP7 | A0A397VAQ2 | A0A397UWA5 | RRM domain-containing protein. | Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.997 |
C2G38_1289857 | SPB1 | A0A397VAQ2 | A0A397TT98 | RRM domain-containing protein. | AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. | 0.997 |
C2G38_2000493 | C2G38_1289857 | A0A397V829 | A0A397VAQ2 | Noc2p family-domain-containing protein. | RRM domain-containing protein. | 0.998 |
C2G38_2000493 | C2G38_2002247 | A0A397V829 | A0A397UZE8 | Noc2p family-domain-containing protein. | RL10P_insert domain-containing protein. | 0.996 |
C2G38_2000493 | C2G38_2131241 | A0A397V829 | A0A397VV47 | Noc2p family-domain-containing protein. | Mitochondrial GTPase 1; Mitochondrial GTPase involved in assembly of the large ribosomal subunit. Plays a role in expression of the mitochondrial translational machinery; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | 0.998 |
C2G38_2000493 | C2G38_2196666 | A0A397V829 | A0A397V3J0 | Noc2p family-domain-containing protein. | Uncharacterized protein. | 0.966 |
C2G38_2000493 | C2G38_2219102 | A0A397V829 | A0A397UE40 | Noc2p family-domain-containing protein. | Ribosome production factor 2. | 0.995 |
C2G38_2000493 | C2G38_2244653 | A0A397V829 | A0A397VCY7 | Noc2p family-domain-containing protein. | Eukaryotic rRNA processing. | 0.996 |
C2G38_2000493 | C2G38_774532 | A0A397V829 | A0A397TZW2 | Noc2p family-domain-containing protein. | Brix domain-containing protein. | 0.996 |
C2G38_2000493 | ERB1 | A0A397V829 | A0A397V0T6 | Noc2p family-domain-containing protein. | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.998 |
C2G38_2000493 | NOP7 | A0A397V829 | A0A397UWA5 | Noc2p family-domain-containing protein. | Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.998 |
C2G38_2000493 | SPB1 | A0A397V829 | A0A397TT98 | Noc2p family-domain-containing protein. | AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. | 0.996 |
page 1 of 6