STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2037463Concanavalin A-like lectin/glucanase domain-containing protein. (277 aa)    
Predicted Functional Partners:
C2G38_587461
Pkinase_Tyr domain-containing protein.
    
  0.582
C2G38_2206545
Protein kinase domain-containing protein.
    
  0.582
C2G38_113557
Kinase-like domain-containing protein.
    
  0.582
C2G38_1988847
WD40-repeat-containing domain protein.
   
 
 0.579
C2G38_2124931
CTLH/CRA C-terminal to lish motif domain-containing protein.
    
 
 0.547
C2G38_2039666
Armadillo-type protein.
    
 
 0.532
C2G38_1985866
Vacuolar import/degradation protein Vid24.
    
 
 0.524
C2G38_2251626
CTLH/CRA C-terminal to lish motif domain-containing protein.
   
 
 0.495
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.