STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2188968UbiA prenyltransferase family-domain-containing protein. (346 aa)    
Predicted Functional Partners:
C2G38_2014629
BTB/POZ protein; Belongs to the SKP1 family.
     
 0.741
C2G38_1982151
Cullin; Belongs to the cullin family.
     
 0.685
C2G38_2145434
HAUS augmin-like complex subunit 4-domain-containing protein.
    
 0.637
C2G38_2255016
Fe/B12 periplasmic-binding domain-containing protein.
    
  0.624
C2G38_2097116
Phorbol-ester/DAG-type domain-containing protein.
    
  0.624
C2G38_2132823
26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.
     
 0.563
C2G38_2037042
Ankyrin repeat-containing domain protein.
    
  0.563
C2G38_514818
TPR_REGION domain-containing protein.
    
 
 0.488
C2G38_2038825
HSP20-like chaperone.
    
   0.465
C2G38_2109055
Ubiquitin-conjugating enzyme/RWD-like protein; Belongs to the ubiquitin-conjugating enzyme family.
     
 0.452
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.