STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2180082C2H2-type domain-containing protein. (448 aa)    
Predicted Functional Partners:
C2G38_1505462
Sedlin.
   
 0.983
C2G38_1972120
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
   
 0.983
C2G38_1984347
Trafficking protein particle complex protein 2.
    
 0.981
C2G38_2210888
ER-golgi trafficking TRAPP I complex 85 kDa subunit-domain-containing protein.
    
 0.981
C2G38_2135400
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
   
 0.981
C2G38_2188573
TRAPP II complex.
    
 0.981
C2G38_2105056
Trafficking protein particle complex subunit 10.
    
 0.980
C2G38_2114691
Gryzun, putative trafficking through golgi-domain-containing protein.
    
 0.964
C2G38_2132016
NO signaling/Golgi transport ligand-binding domain-containing protein.
    
 0.949
C2G38_2180144
Transport protein particle component-domain-containing protein.
    
 0.949
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.