Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C2G38_1430814 | C2G38_1972099 | A0A397VDR6 | A0A397UZY1 | Uncharacterized protein. | Uncharacterized protein. | 0.552 |
C2G38_1430814 | C2G38_2034194 | A0A397VDR6 | A0A397VGS5 | Uncharacterized protein. | Mediator of RNA polymerase II transcription subunit 7; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. | 0.534 |
C2G38_1430814 | C2G38_2049819 | A0A397VDR6 | A0A397TZC9 | Uncharacterized protein. | Uncharacterized protein. | 0.527 |
C2G38_1430814 | C2G38_2091790 | A0A397VDR6 | A0A397V5B4 | Uncharacterized protein. | RPA_C domain-containing protein. | 0.566 |
C2G38_1430814 | C2G38_2172470 | A0A397VDR6 | A0A397VKI0 | Uncharacterized protein. | Mediator complex subunit 15-domain-containing protein. | 0.535 |
C2G38_1430814 | C2G38_2184652 | A0A397VDR6 | A0A397VGF9 | Uncharacterized protein. | Mediator complex subunit 23-domain-containing protein. | 0.535 |
C2G38_1430814 | C2G38_2252757 | A0A397VDR6 | A0A397UAP0 | Uncharacterized protein. | Stn1 domain-containing protein. | 0.566 |
C2G38_1430814 | MED10 | A0A397VDR6 | A0A397US63 | Uncharacterized protein. | Mediator of RNA polymerase II transcription subunit 10; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.535 |
C2G38_1430814 | MED17 | A0A397VDR6 | A0A397TYV4 | Uncharacterized protein. | Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.535 |
C2G38_1430814 | MED4 | A0A397VDR6 | A0A397UHH4 | Uncharacterized protein. | Mediator of RNA polymerase II transcription subunit 4; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.535 |
C2G38_1972099 | C2G38_1430814 | A0A397UZY1 | A0A397VDR6 | Uncharacterized protein. | Uncharacterized protein. | 0.552 |
C2G38_1972099 | C2G38_2034194 | A0A397UZY1 | A0A397VGS5 | Uncharacterized protein. | Mediator of RNA polymerase II transcription subunit 7; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. | 0.534 |
C2G38_1972099 | C2G38_2091790 | A0A397UZY1 | A0A397V5B4 | Uncharacterized protein. | RPA_C domain-containing protein. | 0.566 |
C2G38_1972099 | C2G38_2172470 | A0A397UZY1 | A0A397VKI0 | Uncharacterized protein. | Mediator complex subunit 15-domain-containing protein. | 0.535 |
C2G38_1972099 | C2G38_2184652 | A0A397UZY1 | A0A397VGF9 | Uncharacterized protein. | Mediator complex subunit 23-domain-containing protein. | 0.535 |
C2G38_1972099 | C2G38_2252757 | A0A397UZY1 | A0A397UAP0 | Uncharacterized protein. | Stn1 domain-containing protein. | 0.566 |
C2G38_1972099 | MED10 | A0A397UZY1 | A0A397US63 | Uncharacterized protein. | Mediator of RNA polymerase II transcription subunit 10; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.535 |
C2G38_1972099 | MED17 | A0A397UZY1 | A0A397TYV4 | Uncharacterized protein. | Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.535 |
C2G38_1972099 | MED4 | A0A397UZY1 | A0A397UHH4 | Uncharacterized protein. | Mediator of RNA polymerase II transcription subunit 4; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.535 |
C2G38_2034194 | C2G38_1430814 | A0A397VGS5 | A0A397VDR6 | Mediator of RNA polymerase II transcription subunit 7; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. | Uncharacterized protein. | 0.534 |
page 1 of 5