STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_1913141Fcf1-domain-containing protein. (213 aa)    
Predicted Functional Partners:
C2G38_1951175
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 0.998
C2G38_2138878
WD40-repeat-containing domain protein.
   
 
 0.991
C2G38_2185710
U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.
   
 
 0.969
C2G38_1955795
P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the DEAD box helicase family.
   
 0.960
C2G38_1582208
Small-subunit processome.
   
 
 0.950
C2G38_2159121
Utp14 protein.
   
 
 0.950
C2G38_2211794
Sas10 C-terminal domain-containing protein.
   
 
 0.941
C2G38_1960466
Nucleolar protein 14.
   
 
 0.922
C2G38_2176263
KRI1-like family C-terminal-domain-containing protein.
   
 
 0.918
C2G38_2022090
WD40-repeat-containing domain protein.
   
 
 0.911
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.