STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2300123Amidase signature domain-containing protein. (512 aa)    
Predicted Functional Partners:
C2G38_2146904
Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the GatB/GatE family. GatB subfamily.
 
 0.991
C2G38_1971213
tRNA synthetases class II-domain-containing protein.
  
 0.927
C2G38_1963690
tRNA synthetases class I, catalytic domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.862
C2G38_2136986
Glutamyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.861
C2G38_1978818
Cytosolic 60S large ribosomal protein L39.
  
 0.846
C2G38_2069579
tRNA synthetases class I, catalytic domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.846
C2G38_2249130
Asparaginyl-tRNA synthetase.
   
 0.820
C2G38_2142613
Protein kinase domain-containing protein.
   
 0.820
C2G38_2113865
Aspartyl-tRNA synthetase.
  
 0.807
C2G38_2221939
AA_TRNA_LIGASE_II domain-containing protein.
   
 0.801
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.