STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_1962846Cysteinyl-tRNA synthetase. (752 aa)    
Predicted Functional Partners:
C2G38_772373
Uncharacterized protein.
   
 0.968
C2G38_2245621
Uncharacterized protein.
   
 0.968
C2G38_2206406
Leucine-tRNA ligase.
  
 
 0.884
C2G38_2051106
Tyrosine--tRNA ligase.
  
 
 0.869
C2G38_2131874
EF-1 guanine nucleotide exchange domain-containing protein.
   
 0.861
C2G38_2217484
Tryptophan synthase.
  
 
 0.845
C2G38_1039105
Triosephosphate isomerase.
 
 
  
 0.841
C2G38_1985696
Putative deacetylase LmbE-like domain-containing protein.
  
 
 0.839
C2G38_1969581
Putative deacetylase LmbE-like domain-containing protein.
  
 
 0.839
C2G38_1970872
HAD-like domain-containing protein.
   
 
 0.831
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.