STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_1961009Gcd10p family-domain-containing protein. (382 aa)    
Predicted Functional Partners:
C2G38_2133621
tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRM61; Catalytic subunit of tRNA (adenine-N(1)-)-methyltransferase, which catalyzes the formation of N(1)-methyladenine at position 58 (m1A58) in initiator methionyl-tRNA.
   
 0.993
C2G38_249913
S-adenosyl-L-methionine-dependent methyltransferase.
   
 0.980
SPB1
AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily.
   
  
 0.864
YTM1
Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
    0.822
C2G38_2146874
P-loop containing nucleoside triphosphate hydrolase protein.
   
   0.787
C2G38_2131878
P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the DEAD box helicase family.
   
   0.787
C2G38_51682
RNA helicase.
   
   0.786
C2G38_2253619
P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the DEAD box helicase family.
   
   0.785
C2G38_2197951
P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the DEAD box helicase family.
   
   0.785
C2G38_1568972
Uncharacterized protein.
   
   0.785
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.