STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2243213VWFA domain-containing protein. (2309 aa)    
Predicted Functional Partners:
C2G38_2253523
Protein YOP1.
    
 
 0.645
C2G38_2034497
WD40-repeat-containing domain protein.
    
   0.614
C2G38_1983383
Vesicle transport protein.
    
   0.469
C2G38_2102341
Inositol phospholipid synthesis and fat-storage-inducing TM-domain-containing protein.
    
   0.468
C2G38_1982282
Cytidylyltransferase family-domain-containing protein.
    
   0.456
C2G38_2148317
Reticulon-like protein.
    
 
 0.444
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.