STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2015548ATP-dependent Clp protease proteolytic subunit. (232 aa)    
Predicted Functional Partners:
C2G38_2182045
P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the ClpA/ClpB family.
  
 
 0.978
C2G38_1964552
AAA ATPase domain-containing protein; Belongs to the ClpA/ClpB family.
  
 
 0.978
C2G38_2206430
Putative mitochondrial 10 kDa heat shock protein; Belongs to the GroES chaperonin family.
  
 
 0.881
C2G38_1999896
NADH-ubiquinone oxidoreductase 23 kDa subunit.
   
 
 0.844
C2G38_2033226
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
  
  
 0.836
C2G38_2310419
GrpE nucleotide exchange factor.
   
 
 0.816
C2G38_1955814
GrpE-domain-containing protein; Belongs to the GrpE family.
   
 
 0.816
C2G38_707804
Pyridoxal phosphate-dependent transferase.
  
  0.812
C2G38_2185290
Pyridoxal phosphate-dependent transferase.
  
  0.812
C2G38_1904078
Uncharacterized protein.
  
 
 0.785
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.