STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2170240Rab-GAP TBC domain-containing protein. (877 aa)    
Predicted Functional Partners:
C2G38_351866
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
    
 
 0.974
C2G38_2209540
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 
 0.901
C2G38_2071806
Putative PEP8-vacuolar protein sorting/targeting protein.
   
 
 0.886
C2G38_2120856
Ras family-domain-containing protein.
   
 
 0.787
C2G38_1630992
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.
    
 
 0.606
C2G38_2127056
Rab-GTPase-TBC domain-containing protein.
    
 
0.506
C2G38_1745554
Rab-GTPase-TBC domain-containing protein.
    
 
 0.503
C2G38_1976977
Sorting nexin-3.
    
 
 0.492
C2G38_1975328
Autophagy-related protein.
    
 
 0.479
C2G38_2277009
Peroxin-3.
      
 0.474
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.