STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2165592PAP-associated domain-containing protein. (312 aa)    
Predicted Functional Partners:
C2G38_2048760
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
   
 0.706
C2G38_2132359
Translation initiation factor eIF 4e-like domain-containing protein; Belongs to the eukaryotic initiation factor 4E family.
    
 0.644
C2G38_2122479
Uncharacterized protein.
    
 
 0.602
C2G38_1971047
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
    
  0.598
C2G38_2187998
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
    
  0.598
C2G38_630846
Uncharacterized protein.
    
  0.598
C2G38_2144769
Uncharacterized protein.
   
 0.590
C2G38_2034827
Uncharacterized protein.
   
 0.590
C2G38_2098880
Nuclear envelope protein.
     
 0.588
C2G38_2088055
ATP-dependent RNA helicase FAL1; Belongs to the DEAD box helicase family.
    
  0.584
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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