STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2131209NLI interacting factor. (192 aa)    
Predicted Functional Partners:
C2G38_2030141
Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.
    
 0.904
C2G38_2036594
Lipin/Ned1/Smp2-domain-containing protein.
    
 0.890
C2G38_1964114
Tim17/Tim22/Tim23/Pmp24 family-domain-containing protein.
    
 0.858
C2G38_2123831
TIM21-domain-containing protein.
    
 0.854
C2G38_2014274
Phosphatase activator.
    
 
 0.851
C2G38_1987303
Transcription initiation factor IIF, beta subunit-domain-containing protein.
    
 0.844
C2G38_381867
Tim17/Tim22/Tim23/Pmp24 family-domain-containing protein.
    
 0.831
C2G38_1956978
Uncharacterized protein.
    
 0.831
C2G38_620615
Uncharacterized protein.
    
 0.830
C2G38_463161
DNA-directed RNA polymerases I and III subunit RPAC1-like protein.
    
 0.830
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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