STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2031300Smg-4/UPF3 family-domain-containing protein. (537 aa)    
Predicted Functional Partners:
C2G38_1904644
RRM domain-containing protein.
    
 0.994
C2G38_2088055
ATP-dependent RNA helicase FAL1; Belongs to the DEAD box helicase family.
   
 0.987
C2G38_2306567
Armadillo-type protein.
   
 0.981
C2G38_1974229
Armadillo-type protein.
   
 0.981
C2G38_2042758
PINc domain-containing protein.
    
 0.975
C2G38_2246523
Mago nashi protein.
    
 0.975
C2G38_977094
ATP dependent helicase.
    
 0.965
C2G38_977047
Uncharacterized protein.
    
 0.965
C2G38_2128082
RRM domain-containing protein.
    
 0.959
C2G38_2187196
RRM domain-containing protein.
    
 0.959
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.