STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_1952547Epimerase domain-containing protein. (645 aa)    
Predicted Functional Partners:
C2G38_1963177
40S ribosomal protein S1.
   
 0.891
C2G38_2034522
Putative 40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
 0.876
C2G38_2122194
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
   
  0.868
C2G38_1982663
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
  0.865
C2G38_2006925
Plectin/S10 domain-containing protein.
   
  0.863
C2G38_1969097
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
  0.862
C2G38_1959031
Ribosomal protein S28e.
   
  0.861
C2G38_1963210
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
  0.860
C2G38_1961757
Ribosomal protein S21e.
   
  0.859
C2G38_1972121
40S ribosomal protein S19-A.
   
  0.857
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.